Our Sleeping Patterns Formed 450 Million Years Ago

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Researchers have found that brain patterns in sleeping zebrafish are similar to those of land vertebrates, suggesting that such sleep signatures developed before aquatic and land animals diverged.

Stanford researchers found that when zebrafish sleep, they can display two states that are similar to those found in mammals, reptiles and birds. It’s the first time these brain patterns have been recorded in fish.

Credit: Kazakov Maksim/Shutterstock

Researchers at the Stanford University School of Medicine have found that neural signatures in sleeping zebrafish are analogous to those of humans, suggesting that the brain activity evolved at least 450 million years ago, before any creatures crawled out of the ocean.

Scientists have known for more than 100 years that fish enter a sleeplike state, but until now they didn’t know if their sleep resembled that of land animals.

The researchers found that when zebrafish sleep, they can display two states that are similar to those found in mammals, reptiles and birds: slow-wave sleep and paradoxical, or rapid eye movement, sleep. The discovery marks the first time these brain patterns have been recorded in fish.

“This moves the evolution of neural signatures of sleep back quite a few years,” said postdoctoral scholar Louis Leung, PhD.

A paper describing the research was published July 10 in Nature. Philippe Mourrain, PhD, associate professor of psychiatry and behavioral sciences, is the senior author. Leung is the lead author.

To study the zebrafish, common aquarium dwellers also known as danios, the researchers built a benchtop fluorescent light-sheet microscope capable of full-fish-body imaging with single-cell resolution. They recorded brain activity while the fish slept in an agar solution that immobilized them. They also observed the heart rate, eye movement and muscle tone of the sleeping fish using a fluorescence-based polysomnography that they developed.

They named the sleep states they observed “slow bursting sleep,” which is analogous to slow-wave sleep, and “propagating wave sleep,” analogous to REM sleep. Though the fish don’t move their eyes during REM sleep, the brain and muscle signatures are similar. (Fish also don’t close their eyes when they sleep, as they have no eyelids.)
Sleeping like the fish

The researchers found another similarity between fish and human sleep. By genetically disrupting the function of melanin-concentrating hormone, a peptide that governs the sleep-wake cycle, and observing neural expressions as the fish slept, the researchers determined that the hormone’s signaling regulates the fish’s propagating wave sleep the way it regulates REM sleep in mammals.

Other aspects of their sleep state are similar to those of land vertebrates, Mourrain said: The fish remain still, their muscles relaxed, their cardio-respiratory rhythms slow down and they fail to react when they’re approached.

“They lose muscle tone, their heartbeat drops, they don’t respond to stimuli — the only real difference is a lack of rapid eye movement during REM sleep,” Mourrain said, though he added, “The rapid movement of the eyes is not a good criterion of this state, and we prefer to call it paradoxical sleep, as the brain looks awake while one is asleep.”

While scientists can’t say for certain that all animals sleep, it appears to be a universal need among vertebrates and invertebrates. Animals will die if they are deprived of sleep long enough, and people who fail to receive adequate sleep suffer from mental problems such as memory lapses and impaired judgment, along with a higher risk of disorders such as obesity and high blood pressure.

The exact benefits of sleep are still a mystery, however. “It’s an essential function,” Mourrain said, “but we don’t know precisely what it does.”

He added that sleep disorders are linked to most neurological disorders such as autism spectrum disorders, Fragile X syndrome, and Alzheimer’s and Parkinson’s disease. “Sleep disturbances are an aggravating factor of these disorders,” Mourrain said. It is critical to develop this animal model to study sleep functions at the cellular level, including neuronal connectivity and DNA repair, and in turn understand the pathophysiological consequences of sleep disruptions, he added.

The discovery means sleep research can be conducted on zebrafish, which are easy to study, in part because they’re transparent. They breed quickly, are inexpensive to care for and are just over an inch long. Drug testing requires only the addition of chemicals to their water.

“Because the fish neural signatures are in essence the same as ours, we can use information about them to generate new leads for drug trials,” Leung said. He added that mice, often a stand-in for human research, are nocturnal and a less relevant model for our sleep.

“As zebrafish are diurnal like humans, it’s perhaps more biologically accurate to compare fish sleep with humans for some aspects,” Leung said.

Mourrain is a member of Stanford Bio-X and the Wu Tsai Neurosciences Institute at Stanford.

Other Stanford co-authors are Gordon Wang, PhD, clinical assistant professor of psychiatry and behavioral sciences; postdoctoral scholar Romain Madelaine, PhD; life sciences researcher Gemini Skariah; Karl Deisseroth, MD, PhD, professor of bioengineering and of psychiatry and behavioral sciences; and Alexander Urban, PhD, assistant professor of psychiatry and behavioral sciences.

Researchers at the National Institute of Genetics in Mishima, Japan, also contributed to the study.

The work was funded by the National Institutes of Health (grant JP18H04988), the National Institute of Neurological Disorders and Stroke, the National Institute of Diabetes and Digestive and Kidney Diseases, the National Institute of Mental Health, the National Institute on Drug Abuse, the National Institute on Aging, the National BioResource Project, the Defense Advanced Research Projects Agency, the National Science Foundation, the Wiegers Family Fund, the AE Foundation, the Tarlton Foundation, the Gatsby Foundation, the Tashia and John Morgridge Fund, the Stanford School of Medicine Dean’s Fellowship, the Bright-Focus Foundation, the Simons Foundation and the John Merck Fund.

Stanford’s Department of Psychiatry and Behavioral Sciences also supported the work.

Contacts and sources:
Mandy Erickson

Stanford Health

Citation: Neural signatures of sleep in zebrafish.
Louis C. Leung, Gordon X. Wang, Romain Madelaine, Gemini Skariah, Koichi Kawakami, Karl Deisseroth, Alexander E. Urban, Philippe Mourrain. Nature, 2019; 571 (7764): 198 DOI: 10.1038/s41586-019-1336-7